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Ph.D. Opportunities in Molecular Geomicrobiology of the Deep Biosphere at East Carolina University

Ph.D. opportunities are available in molecular geomicrobiology of the deep biosphere in the lab of Matt Schrenk at East Carolina University (North Carolina, USA). The research involves the characterization of high pH (>10), hydrogen and methane-rich ecosystems associated with the serpentinization of ultramafic rocks from the deep Earth and involves multi-disciplinary, international research projects in Canada, Italy, and California. These projects focus on advancing our understanding of the ecology and evolution of microbial communities in the deep biosphere using both molecular and culture-based approaches. Research combines bioinformatics analyses of (meta-) genomic and transcriptomic data with field work and laboratory characterization of novel extremophiles.

Applicants with a background in Biology, Earth Sciences, Oceanography, or related disciplines are encouraged to apply. Applications for the Ph.D. program in Biology at ECU are due April 1, 2012 (http://www.ecu.edu/cs-cas/idpbs/admission.cfm). Please contact Matt Schrenk (schrenkm@ecu.edu) for further information. Posted January 2012.

 

Postdoctoral Positions for the Deep Life Initiative of the Deep Carbon Observatory

The Deep Life Directorate of the Deep Carbon Observatory (sponsored by the Alfred P. Sloan Foundation) will investigate the microbiology of the rock-hosted subsurface biosphere. The Directorate seeks candidates for multiple Postdoctoral positions to work within this cooperative framework. High Pressure Microbiology: Developing experimental approaches that will provide novel piezophilic cultivars whose activities can be investigated under in situ pressure-temperature conditions; a joint project between Isabelle Daniel’s Lab at the Université Claude Bernard Lyon 1 (France) and Doug Bartlett’s lab at the Scripps Institution of Oceanography, San Diego, CA (USA). Molecular Geomicrobiology: Linking stable isotope based approaches with metagenomic and transcriptomic studies of microbial metabolism of specific carbon compounds; Matt Schrenk’s lab at East Carolina University (North Carolina, USA) with collaborators at the Marine Biological Laboratory (J. Huber). Hydrothermal Vent Microbiology: Analysis of samples from the Mid Cayman Spreading Center, Earth’s deepest mid-ocean ridge, with an emphasis on using next generation sequencing tools to determine microbial community structure and functional repertoire at the site; Julie Huber’s lab at the Marine Biological Laboratory (Woods Hole, MA). Deep Subsurface Microbial Biogeography and Evolutionary Processes: Two positions applying single cell genomic analyses to subsurface communities sampled from deep boreholes and mine sites located in Finland, Canada and South Africa; University of the Free State (Bloemfontein, South Africa) and Princeton University (Princeton, NJ, USA) and also time at the Single Cell Genomics Center at the Bigelow Laboratory for Ocean Sciences (Maine, USA). [More]

For any of the positions please submit three items to the appropriate contact listed below: (i) a cover letter describing your research goals and your specific motivation to join the project, (ii) a CV, and (iii) contact information for three references, including your Ph.D. supervisor.
- High Pressure Microbiology position: Prof. Isabelle Daniel (isabelle.daniel@univ-lyon1.fr)
- Molecular Geomicrobiology position: Matt Schrenk (schrenkm@ecu.edu)
- Hydrothermal Vent Microbiology position: Julie Huber (jhuber@mbl.edu)
- Deep Subsurface Microbial Biogeography: T.C. Onstott (tullis@princeton.edu)
Applications should be received by March 1, 2012, but will be considered on an ongoing basis. Posted January 2012.

 

M.S. Position in Environmental Chemistry at the University of Maryland Center for Environmental Science (UMCES)

We invite applications from talented and highly motivated students interested in pursuing a M.S. degree in Environmental Chemistry. As part of the ECOGIG (Ecosystem impacts of oil and gas inputs to the Gulf) consortium, the successful applicant will participate in a collaborative project to study the long-term impacts of the 2010 Gulf of Mexico oil spill on deep-water sedimentary microbial communities. [More]

Applicants are expected to hold a B.S. in Chemistry or Biology, or other related field, and start in the fall of 2012. The prospective students must be admitted to the University of Maryland Marine-Estuarine-Environmental Sciences (MEES) program and will conduct research at the UMCES Chesapeake Biological Laboratory under the direction of Dr. Laura Lapham. For more information, please send an email with “student opportunity” in the subject line to Laura Lapham (lapham@umces.edu) and include a short statement of interest, a CV, list of courses taken, and contact information for 3 references. The deadline for the MEES program applications is February 1, 2012. Posted January 2012.

 

Postdoctoral Research Associates and Graduate Student Positions in Biogeochemistry and Microbial Molecular Ecology at the University of Georgia

The Joye Group at the University of Georgia invites applications for two postdoctoral researchers and a graduate student in the areas of extreme biogeochemistry and molecular microbial ecology. The selected individuals will employ biogeochemical and molecular tools to characterize brine and oil-influenced habitats in Antarctica (former) and the Gulf of Mexico (latter). The selected individuals will characterize habitats using a range of geochemical techniques, quantify rates of microbial activity using radiotracer and stable isotopic approaches, and determine microbial community structure using techniques such as FISH, CARD-FISH, MICRO-FISH, and SIP. Interested candidates should be highly motivated, organized, independent, and have extensive experience using the tools of biogeochemistry and/or molecular microbiology. The projects supporting these positions require 1-2 months per year at sea or in the field. [More]

The postdoctoral positions are funded by extramural research grants; salary will be commensurate with experience and the appointment is limited (initially for 1 year and renewable for up to three years). The PhD position is also grant funded and includes benefits and a tuition waiver. Applicants for the positions should send a curriculum vitae, a statement of research interests and career goals, and the names and addresses of three academic references to: Dr. Mandy Joye (mjoye@uga.edu), Department of Marine Sciences, University of Georgia, Athens, GA. Applications received by December 15, 2011 will receive full consideration. Posted November 2011.

 

Postdoctoral Research Associate in C-DEBI Laboratory at the University of Southern California

The USC Dana and David Dornsife College of Letters, Arts and Sciences Center for Dark Energy Biosphere Investigations laboratory of Dr. Katrina Edwards at the University of Southern California (earth.usc.edu/~kje/) is seeking highly-motivated, self-driven scientists to conduct postdoctoral research related to objectives of the Center for Dark Energy Biosphere Investigations. Do you have an interest in the marine deep biosphere, hydrothermal systems, and other exciting geomicrobiology investigations at the bottom of the ocean? Are you looking for a postdoctoral position that will allow you to combine state-of-the-art molecular biology, microscopy, biogeochemistry techniques and observatory science/field work to study cutting edge research questions? Opportunities are available for conducting metagenomic, proteomic, and single cell isolation research with environmental samples. [More]

Candidates should have experience with molecular biology techniques such as DNA sequencing with environmental materials - experience with (meta)genomic analysis and next generation sequencing techniques a plus. Working knowledge of epifluorescence, confocal laser scanning, or laser microdissection microscopy desired. Familiarity with geochemical techniques and field oceanographic experience a plus. Interested applicants should send a statement of research objectives, a CV, and a list of three references to kje@usc.edu and apply through the USC website listed above for requisition 010161. Posted October 2011.

 

Assistant Professor in Microbial Ecology at the University of Illinois at Chicago

The Department of Biological Sciences at the University of Illinois at Chicago invites applications for an assistant professor level position effective August 16, 2012. We are interested in candidates who use experimental modern molecular techniques, including genomics, metagenomics, proteomics, and bioinformatics, to address the functional ecology of microorganisms including, but not limited to, microbial controls of nutrient cycling, community and/or population ecology of microbes, microbial diversity, phylogeny, and microbial processes and interactions in complex systems including urban environments. The successful candidate is expected to develop a vigorous, externally funded, and collaborative research laboratory that strengthens the current programs within the department and across campus. [More]

Applicants must have a Ph.D., significant postdoctoral experience, and a demonstrated record of research accomplishments. For fullest consideration, candidates must complete an on-line application and submit a CV, research and teaching statements, and the names and email addresses of 3 references by November 18, 2011. Posted October 2011.

 

Campus Alberta Innovation Chairs at the University of Calgary: Biotechnological Applications of the Deep Biosphere Metagenome and Reservoir Biogeoscience

We are proposing Chairs in the theme of Energy and the Environment that will enhance Alberta's innovation potential at the intersection of geosciences, biology and biotechnology, and material sciences. A Chair in Reservoir Biogeoscience will research how molecular and microbial processes can be used in earth's deep subsurface rocks (the "deep biosphere") to extract energy supplies with a reduced carbon footprint. A complementary second Chair in biogeosciences also examines earth's subsurface microbial organisms, with a focus instead on application and innovations in specialty chemical production, biosensors, and antibiotics. Combining naturally occurring microbes with the ability to genetically engineer them to more efficiently recover energy with less environmental impact will place Alberta at the forefront of innovative science and commercial applications. These two biogeoscience chairs will be held at the University of Calgary, and will build upon considerable research depth there and at the University of Alberta in microbial ecology and genetic engineering of microbes for commercial application. [More]

Contact Steve Larter (slarter@ucalgary.ca) for more information. Applications, including a statement of research interest, curriculum vitae and the names of three referees, should be submitted before October 31, 2011. The competition will remain open until suitable candidates are appointed. Posted October 2011.

 

Ph.D. Opportunities in Permafrost, Sub-Glacial and Terrestrial Deep Biosphere Microbial Ecology at Princeton University

PhD opportunities are available in the Geomicrobiology research group at Princeton University’s Department of Geosciences. The research involves multidisciplinary, international research projects in the Canadian High Arctic, Greenland and South Africa. These projects focus on delineation of the carbon trophic pathways in terrestrial subsurface environments. The projects combine molecular and geochemical analyses with C and H stable isotopes and 14C analyses of dissolved hydrocarbons, inorganic carbon and organic acids, C and H stable isotope and 14C analyses of lipids, stable isotope probes, SIP, of the 16S rRNA, 14C isotope microarrays, characterization of the DOC and CRDS isotope analyses of trace gases. [More]

If you are interested in applying, contact T.C. Onstott (tullis@princeton.edu) and visit the Graduate School Website. Deadline for all Princeton University Graduate School Applications: December 31, 2011. Posted October 2011.

 

Postdoctoral Position in Microbial Ecology at the Desert Research Institute

The Desert Research Institute’s Division of Earth and Ecosystem Sciences (DEES) is accepting applications for a Postdoctoral Fellow in microbial ecology/geobiology at DRI’s Las Vegas campus. This position, funded primarily through the U.S. Department of Energy (DOE) Subsurface Biogeochemical Research program (SBR), will build upon preliminary evidence suggesting that deep terrestrial subsurface microbial ecosystems may be supported by radiochemical reactions at DOE legacy waste sites. This novel mechanism for sustaining deep life has recently been established through related work in the world’s deepest mines in South Africa (Science, 322:275-8) and may be of practical relevance for understanding the mobility of actinide contaminants in subsurface aquifers.

The research will integrate environmental science with traditional microbiology and bioinformatics. Major field activities will involve the sampling of borehole fluids from subsurface habitats altered by nuclear detonations at the Nevada National Security Site (NNSS, formerly the Nevada Test Site). Specific project objectives will include microbial community and genomic assessments of radioactive and non-radioactive groundwater and rock samples, cultivation and characterization of relevant microbial physiotypes, and the development of laboratory microcosms. The successful candidate will be part of an interdisciplinary team composed of researchers from DRI, Lawrence Livermore National Laboratory, the University of Nevada Las Vegas (UNLV), Princeton University, The University of Toronto, Lawrence Berkeley National Laboratory, and Bigelow Laboratory. Although the primary focus of the research is microbiology, the ideal candidate will be conversant in related fields and able to integrate datasets from collaborators with expertise in hydrogeology, radio- and environmental chemistry, and thermodynamics into a coherent narrative. As such, this position provides an extraordinary opportunity for training and networking. Individuals with a demonstrable publication record and solid foundation in molecular ecology/bioinformatics are especially encouraged to apply. [More]

Submit a cover letter describing your experience, career goals and project interests; a curriculum vitae; and contact information for three professional references when you apply on-line at www.jobs.dri.edu. Questions can be directed to Dr. Duane Moser (duane.moser@dri.edu), Postdoctoral Fellow – Microbial Ecology Search Committee Chair, Desert Research Institute, Las Vegas, NV. Review of applications will begin immediately and continue until the position is filled. Posted September 2011.

 

Postdoctoral Position in Biogeophysics at Oklahoma State University

The Biogeophysics Group at Oklahoma State University has an immediate opening for a scientist at the postdoctoral level to investigate geoelectrical signatures of microbial biofilms in our new state-of-the-art biogeophysical laboratory. The position is for three years. The objectives include: (i) evaluating the contribution of biofilm components to geoelectrical signatures using field relevant organisms, (ii) determining if the geoelectrical signatures can be used to quantify the rates of biofilm formation and biogenic mineral accumulation in subsurface media, (iii) evaluating the use of reactive transport models to predict the geophysical response associated with the development of biofilms in field conditions. Clogging of porous media by microorganisms using electrical geophysical techniques will also be investigated. It is expected that these investigations will develop standardized geophysical methods as tools to accurately assess microbial metabolic activity at DOE contaminated sites.

The preferred candidate will have a PhD in Geophysics (with strong emphasis on electrical techniques) or relevant field (e.g., environmental engineering, environmental microbiology, biophysics) with experience related to microbial community analysis using molecular biology techniques and/ or the cultivation of anaerobic prokaryotes, biofilms, bioclogging, electrochemistry, and or biogeophysics. We seek to hire a highly motivated, enthusiastic; and creative individual who is capable of working and thinking independently. The salary is attractive and will include full benefits. Oklahoma State University is an equal opportunity/affirmative action employer. Minorities, women, veterans, and persons with disabilities are strongly encouraged to apply.

Candidates should submit a full CV, including the contact information of three referees, to: Prof. Estella Atekwana (estella.atekwana@okstate.edu), Oklahoma State University, School of Geology, Stillwater, OK. The position will remain open until a suitable candidate is found. Posted August 2011.

 

Postdoctoral Position in Marine Hydrogeology at the University of California, Santa Cruz

The successful candidate will participate in research involving seafloor hydrothermal systems in association with the Center for Dark Energy Biosphere Investigations (a NSF Science and Technology Center), assist in supervising graduate and undergraduate student researchers, provide scientific and technical support, and carry out independent research. Research may include a combination of oceanographic data and sample collection; processing and interpretation of seismic, mapping, heat flow, and other data; geotechnical testing of recovered materials; and/or numerical modeling of coupled flows within the seafloor.

Qualifications: Ph.D. in geophysics, hydrogeology, geology, geochemistry or a related field; strong computational skills; no more than three years of postdoctoral research experience; ability to work independently and as part of a team; strong communication and interpersonal skills. A successful candidate would also have expertise in one or more of the following research areas (and interest in learning others): marine or terrestrial geothermics, numerical modeling of coupled flows (fluid-heat, fluid-solute), reflection seismic data acquisition and processing, multibeam mapping data acquisition and processing, cross-hole hydrogeologic (tracer, flow) testing. Intent of initial appointment is for one year, full time, with reappointment for another year contingent on progress. Funding for multiple years is in hand. [More]

Contact Dr. Andrew Fisher (afisher@ucsc.edu), Earth and Planetary Sciences Department, University of California, Santa Cruz, CA. Posted August 2011.

 

Listings with other professional organizations

American Society for Microbiology: Career Connections
Consortium for Ocean Leadership: Employment Opportunities
Geochemical Society: Job Links
Geological Society of America: Resources and Jobs
International Society for Microbial Ecology: Employment Listings
 

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