RESEARCH ACTIVITIES

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Funded Research and Travel Exchanges

We are proud to support the following C-DEBI projects.


Mark Friedman, Animo Leadership Charter High School
Attendance at 2010 National Association of Biology Teachers (NABT) conference

Mark Friedman presented the workshop "Teach Marine Biology in Lieu of Biology" at the 2010 National Association of Biology Teachers conference in Minneapolis. This comprehensive biology course for high school students focuses on marine life and covers all California State Biology Standards. Developed by Los Angeles area high school teachers who currently teach Biology and Marine Biology with support from COSEE-West, online and sample materials (lesson plans, labs, activities, games, puzzles, web interactives, movies with thought questions, web quests, etc. with many resources available in Spanish for ELL) were introduced. The workshop also introduced educators to the new C-DEBI project including the “Adopt a microbe” effort, the ability to SKYPE the Joides Resolution from classrooms, and the forthcoming materials like lesson plans and activities that will be developed by teachers and students associated with C-DEBI.


Brian Glazer, University of Hawaii
Participation on AT18-07 Juan de Fuca Ridge expedition

Glazer’s participation on the AT18-07 expedition to the Juan de Fuca Ridge Flank was part of a collaborative effort researching geochemistry and microbiology of subsurface fluids obtained from CORK observatories. During this cruise Glazer’s primary goals were to conduct in situ electrochemical and optical oxygen measurements during real-time fluid sampling on ROV Jason-II, and to recover and redeploy an in situ electrochemical analyzer on a time-series instrument sled (GeoMICROBE) deployed to 1301A in 2010. In combination with temperature and optical oxygen measurements, in situ voltammetry was a useful real-time diagnostic indicator of successful connection to the CORK Fluid Delivery System. Preliminary results suggest delivery of fluids to seafloor samplers during AT18-07, especially at 1362B and 1362A, were highest integrity, lowest oxygen, formation fluids collected to date.


Beth Orcutt, Aarhus University, USC
Attendance at 2010 American Geophysical Union (AGU) fall meeting

My attendance at this conference promoted oceanic subsurface microbial observatory research in general and also encouraged future collaborations with the terrestrial subsurface research community, as well as promoting the educational goals of C-DEBI. I presented results of the collaborative research in development and use of oceanic subsurface microbial observatories in the AGU Session H52: “Rocks, Fractures, Fluids and Life; Insights from Underground Research Laboratories”. I highlighted the ongoing observatory work being conducted on the Juan de Fuca Ridge flank, a central focus of the C-DEBI program. In addition, I presented information about the “Adopt A Microbe” (AAM) education and outreach project in the AGU Session ED17: “Teacher Professional Development Programs Promoting Authentic Scientific Research in the Classroom”. AAM was a custom internet-based project of IODP Expedition 327 to promote interactive learning about microbial life in the deep biosphere. With encouragement from the Deep Earth Academy, I presented information about how the project was developed and provided user-feedback to help a future generation of expedition educators develop similar programs. I also volunteered at the C-DEBI vendor booth at the AGU conference, to further promote CDEBI to the research and education communities.


NEW! Beth Orcutt, Aarhus University, USC and Everett Salas, Photon Systems
Evaluating the use of common fluorophore-oligonucleotide probes and stains for identifying specific groups of microorganisms with deep UV-induced fluorescence

This exchange is for travel and research support for a new collaborative project aiming to expand the utility of deep UV fluorescence microscopy techniques for working with environmental samples. Specifically, we propose to test the applicability of common fluorophore-labeled oligonucleotides, often used in environmental microbiology studies to determine the abundance of particular microbial groups, to sample scanning with current deep UV microscopes. We predict that some fluorophores should generate unique spectral signatures with deep UV excitation, and that these signatures could be utilized for mapping the distribution of specific microbial groups targeted with oligonucleotide-fluorophore probes. If successful, the combination of group-specific labeling of cells with deep UV fluorescence scanning will provide a powerful new tool for the C-DEBI community.

 

> See more on our research and travel exchange program.
> Our DEBI RCN Graduate Student and Postdoctoral Exchange program also supports graduate student and Postdoctoral research exchanges to facilitate collaborations among deep biosphere research groups with the end goal of building and educating the community.
 

 

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